Select Category: CSG Analysis Mesh Operations Utilities Visualization

CSG Analysis

longbone_Analysis	A wrapper for batch processing with longbone_*Geometry functions.
longbone_AnatomicalNormals	Compute the normals of the transverse and coronal planes.
longbone_AnatomicalPosition	Rotate into anatomical posistion.
longbone_CustomGeometry	This function analyzes the cross-sectional geometry of an intact humerus, ulna, femur, or tibia bone along its longitudinal axis at custom intervals.
longbone_FragmentGeometry	This function analyzes the cross-sectional geometry of any diaphyseal long bone fragment at custom intervals defined by user defined points on the bone's surface.
longbone_Geometry	This function analyzes the cross-sectional geometry of an intact humerus, ulna, femur, or tibia bone at 20%, 35%, 50%, 65% and 80% along the bone's maximum length.
longbone_Measurements	Measurement names of long bone geometry data.
longbone_Registration	Determine long bone type and register initial alignment points.
simple_polygon3D	This function takes the 3D coordinates of a planar cross section along with with its normal and calculates some of its geometric properties such as cross sectional area, perimeter and principal second moments of area.

Mesh Operations

longbone_maxDistance	Calculate the maximum distance of a long bone 3D model.
longbone_Scaling	Scale triangular meshes stored in Wavefront OBJ format.
meshArea	Compute the surface area of a triangular mesh based on itsvertices and faces provided as input arguments.
meshBarycenter	Compute the 3D coordinates of the polygon barycenter of a triangular 3D Mesh based on its vertices and faces provided as input arguments.
meshRotation	Rotate a 3D mesh.
meshSection	Compute the sectioning points of triangular 3D mesh.
read_MeshlabPoints	Read 3D coordinates from a MeshLab PickedPoints file.
write_MeshlabPoints	Write 3D coordinates in a MeshLab PickedPoints file.
readObj	This function reads a triangular 3D Mesh from Wavefront OBJ file and returns its elements into a variable number of output arguments.
renameObj	Rename an OBJ file containing a pure triangular mesh in Wavefront 3D model file format and its associated material library and texture map files.
writeObj	This function saves a triangular 3D Mesh in a Wavefront OBJ file format according to its elements provided as input arguments.

Utilities

LongBone	Class for manipulating 3-D triangular meshes of human long bones.
longbone_Sex	This function analyzes the geometry of an intact humerus, ulna, femur, or tibia bone using the 'longbone_Geometry' function and estimates the biological sex of the individual the bone belongs to.

Visualization

inspect_CSG	Batch inspect the CSG properties of previously analyzed long bones.
visualize_CrossSections	Plot cross sectional contours and their CSG properties for a given sample.