Function Reference: estimate_sex

csg-toolkit: estimate_sex

Estimate biological sex from long bone CSG properties.

estimate_sex opens a graphical user interface (GUI) to facilitate biological sex estimation from the long bones of the upper and lower limbs. By default, it utilizes a multi-model sex classifier based on a modern Greek population sample, derived from the Athens Collection. The GUI allows the user to either select a CSV file containing the CSG properties or an OBJ file contating the 3D bone model. The CSV file must follow the structure of the file generated by the inspect_CSG function and it is highly recommended to generate it with inspect_CSG. The OBJ file must a pure triangular 3D mesh containing a single bone model. When analyzing OBJ models the type of bone is automatically determined, whereas when analyzing CSG data from a CSV file the user must select the appropriate type of bone in the GUI. In both cases, the user can select the appropriate side (left-right) of the bone that is being analyzed. The long bones currently supported are the femur, tibia, and humerus. Once you have loaded a file (CSV or OBJ), a small rectangular button, denoted with a 'U', appears on the left hand size of the loaded file allowing to upload a different file once you have finished exploring the different sex estimation models that are available. Pressing the save button allow you to save the currently selected results in a CSV file. If the file already exists and it has the appropriate structure, i.e. it was previously generated with the GUI, the results are appended at the end of the file (adding new lines), otherwise the selected file is overwritten or newly created.

You can find further information about the statistics behind the estimate_sex function in the following publication. Please, cite the following article, if you find this tool useful for your workflow in academic research.

References

  1. Bertsatos, A., Garoufi, N., & Chovalopoulou, M.-E. (2020). Advancements in sex estimation using the diaphyseal cross-sectional geometric properties of the lower and upper limbs. International Journal of Legal Medicine. https://doi.org/10.1007/s00414-020-02437-3

See also: inspect_CSG, longbone_Geometry, longbone_Registration

Source Code: estimate_sex